Abstract: The outcome of a Multiple Sequence Alignment (MSA) can be compactly represented by means of Elastic-Degenerate Strings (ED-strings) by collapsing conserved fragments into standard linear ...
Abstract: Sequence alignment is a crucial tool in biological research. Alignment quality is typically assessed using scores, but these do not guarantee optimality. Estimating the optimal alignment ...
The reliability of multiple sequence alignment (MSA) results directly determines the credibility of the conclusions drawn from biological research. However, MSA is inherently an NP-hard problem, ...
In this tutorial, we demonstrate how to build an advanced yet accessible Bioinformatics AI Agent using Biopython and popular Python libraries, designed to run seamlessly in Google Colab. By combining ...
1 School of Computer Science, University College Dublin, Dublin, Ireland 2 Department of Computer Science, College of Science, Northern Border University, Arar, Saudi Arabia DeepPredict is a freely ...
salti is a standalone, self-contained terminal user interface (TUI) application designed for the browsing and inspection of multiple sequence alignments in FASTA format. The application operates ...
ABSTRACT: Piptoporellus baudonii, previously known as Laetiporus baudonii, is an African species that was considered to be a sister species to Laetiporus sulphureus, another European species known for ...
The entire project consists of two parts. The first part is a FASTA parser, which reads specific genetic data provided in the package and formats the output for the second part of the code. The second ...
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